Shetty, Amol C.: search on Z-Library

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1

Brain feminization requires active repression of masculinization via DNA methylation

Nugent, Bridget M, Wright, Christopher L, Shetty, Amol C, Hodes, Georgia E, Lenz, Kathryn M, Mahurkar, Anup, Russo, Scott J, Devine, Scott E, McCarthy, Margaret M

Journal:

Nature Neuroscience

Year:

2015

Language:

english

File:

PDF, 2.00 MB

english, 2015

2

Targeted enrichment outperforms other enrichment techniques and enables more multi-species RNA-Seq analyses

Chung, Matthew, Teigen, Laura, Liu, Hong, Libro, Silvia, Shetty, Amol, Kumar, Nikhil, Zhao, Xuechu, Bromley, Robin E., Tallon, Luke J., Sadzewicz, Lisa, Fraser, Claire M., Rasko, David A., Filler, Sco

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 2.20 MB

english, 2018

3

Rapid transcriptome sequencing of an invasive pest, the brown marmorated stink bug Halyomorpha halys

Ioannidis, Panagiotis, Lu, Yong, Kumar, Nikhil, Creasy, Todd, Daugherty, Sean, Chibucos, Marcus C, Orvis, Joshua, Shetty, Amol, Ott, Sandra, Flowers, Melissa, Sengamalay, Naomi, Tallon, Luke J, Pick,

Journal:

Year:

2014

Language:

english

File:

PDF, 1.64 MB

english, 2014

4

Identification of rare X-linked neuroligin variants by massively parallel sequencing in males with autism spectrum disorder

Karyn Meltz Steinberg, Dhanya Ramachandran, Viren C Patel, Amol C Shetty, David J Cutler, Michael E Zwick

Journal:

Molecular Autism

Year:

2012

Language:

english

File:

PDF, 366 KB

english, 2012

5

Evolutionary history of modern Samoans

Harris, Daniel N., Kessler, Michael D., Shetty, Amol C., Weeks, Daniel E., Minster, Ryan L., Browning, Sharon, Cochrane, Ethan E., Deka, Ranjan, Hawley, Nicola L., Reupena, Muagututiâa Sefuiva, Nase

Journal:

Proceedings of the National Academy of Sciences

Year:

2020

File:

PDF, 1.16 MB

2020

6

[IEEE 2015 International Conference on Technologies for Sustainable Development (ICTSD) - Mumbai, India (2015.2.4-2015.2.6)] 2015 International Conference on Technologies for Sustainable Development (ICTSD) - Hydraulic ram pump: Maximizing efficiency

Nambiar, Prasanna, Shetty, Amol, Thatte, Amogh, Lonkar, Shubham, Jokhi, Vishtasp

Year:

2015

Language:

english

File:

PDF, 277 KB

english, 2015

7

Challenges and disparities in the application of personalized genomic medicine to populations with African ancestry

Kessler, Michael D., Yerges-Armstrong, Laura, Taub, Margaret A., Shetty, Amol C., Maloney, Kristin, Jeng, Linda Jo Bone, Ruczinski, Ingo, Levin, Albert M., Williams, L. Keoki, Beaty, Terri H., Mathias

Journal:

Nature Communications

Year:

2016

Language:

english

File:

PDF, 603 KB

english, 2016

8

Genome-wide small nucleolar RNA expression analysis of lung cancer by next-generation deep sequencing

Gao, Lu, Ma, Jie, Mannoor, Kaiissar, Guarnera, Maria A., Shetty, Amol, Zhan, Min, Xing, Lingxiao, Stass, Sanford A., Jiang, Feng

Journal:

International Journal of Cancer

Year:

2015

Language:

english

File:

PDF, 234 KB

english, 2015

9

DNA Methylation Patterns in Cord Blood of Neonates Across Gestational Age

Braid, Susan M., Okrah, Kwame, Shetty, Amol, Corrada Bravo, Hector

Journal:

Nursing Research

Year:

2017

Language:

english

File:

PDF, 539 KB

english, 2017

10

Cross-species transcriptional analysis reveals conserved and host-specific neoplastic processes in mammalian glioma

Connolly, Nina P., Shetty, Amol C., Stokum, Jesse A., Hoeschele, Ina, Siegel, Marni B., Miller, C. Ryan, Kim, Anthony J., Ho, Cheng-Ying, Davila, Eduardo, Simard, J. Marc, Devine, Scott E., Rossmeisl,

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 2.75 MB

english, 2018

11

Aerosol Synthesis of Lipid Nanoparticles: Relating Crystallinity to Simulated Evaporation Rates

Shetty, Manish, Pawar, Amol A., Mehra, Anurag, Venkataraman, Chandra

Journal:

Aerosol Science & Technology

Year:

2012

Language:

english

File:

PDF, 382 KB

english, 2012

12

Inhibition of EGFR Signaling Protects from Mucormycosis

Watkins, Tonya N., Gebremariam, Teclegiorgis, Swidergall, Marc, Shetty, Amol C., Graf, Karen T., Alqarihi, Abdullah, Alkhazraji, Sondus, Alsaadi, Abrar I., Edwards, Vonetta L., Filler, Scott G., Ibrah

Journal:

Year:

2018

Language:

english

File:

PDF, 1.98 MB

english, 2018

13

Unique gene program of rat small resistance mesenteric arteries as revealed by deep RNA sequencing

Reho, John J., Shetty, Amol, Dippold, Rachael P., Mahurkar, Anup, Fisher, Steven A.

Journal:

Physiological Reports

Year:

2015

Language:

english

File:

PDF, 367 KB

english, 2015

14

A novel mutation in the Plasmodium falciparum chloroquine resistance transporter is associated with decreased piperaquine sensitivity

Agrawal, Sonia, Moser, Kara A, Morton, Lindsay, Cummings, Michael P, Parihar, Ankita, Dwivedi, Ankit, Shetty, Amol C, Drabek, Elliott F, Jacob, Christopher G, Henrich, Philipp P, Parobek, Christian M,

Journal:

The Journal of Infectious Diseases

Year:

2017

Language:

english

File:

PDF, 830 KB

english, 2017

15

Iron restriction inside macrophages regulates pulmonary host defense against Rhizopus species

Andrianaki, Angeliki M., Kyrmizi, Irene, Thanopoulou, Kalliopi, Baldin, Clara, Drakos, Elias, Soliman, Sameh S. M., Shetty, Amol C., McCracken, Carrie, Akoumianaki, Tonia, Stylianou, Kostas, Ioannou,

Journal:

Nature Communications

Year:

2018

File:

PDF, 3.65 MB

2018

16

Effect of a small molecule Lipid II binder on bacterial cell wall stress

Malin, Jakob, Shetty, Amol, Daugherty, Sean, de Leeuw, Erik

Journal:

Infection and Drug Resistance

Year:

2017

Language:

english

File:

PDF, 805 KB

english, 2017

17

Oral epithelial IL-22/STAT3 signaling licenses IL-17âmediated immunity to oral mucosal candidiasis

Aggor, Felix E. Y., Break, Timothy J., Trevejo-NuÃ±ez, Giraldina, Whibley, Natasha, Coleman, Bianca M., Bailey, Rachel D., Kaplan, Daniel H., Naglik, Julian R., Shan, Wei, Shetty, Amol C., McCracken,

Journal:

Science Immunology

Year:

2020

File:

PDF, 1.35 MB

2020

18

A phosphorylation-wide sncRNA screen reveals Protein Functional Effector sncRNAs (pfeRNAs) in human lung somatic cells

Gable, Tyler, Wang, Yuyan, Clark, David, Kumari, Priti, Shetty, Amol Carl, Li, Mao, Mei, Yuping

Journal:

Year:

2017

Language:

english

File:

PDF, 2.39 MB

english, 2017

19

Identification of a gene expression signature associated with the metastasis suppressor function of NME1: prognostic value in human melanoma

Leonard, M Kathryn, McCorkle, Joseph R, Snyder, Devin E, Novak, Marian, Zhang, Qingbei, Shetty, Amol C, Mahurkar, Anup A, Kaetzel, David M

Journal:

Laboratory Investigation

Year:

2017

Language:

english

File:

PDF, 1.40 MB

english, 2017

20

SeqAnt: A web service to rapidly identify and annotate DNA sequence variations

Amol Carl Shetty, Prashanth Athri, Kajari Mondal, Vanessa L Horner, Karyn Meltz Steinberg, Viren Patel, Tamara Caspary, David J Cutler, Michael E Zwick

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 1.62 MB

english, 2010

21

Transcriptional Variation of Diverse Enteropathogenic Escherichia coli Isolates under Virulence-Inducing Conditions

Hazen, Tracy H., Daugherty, Sean C., Shetty, Amol C., Nataro, James P., Rasko, David A., Whiteson, Katrine L.

Journal:

Year:

2017

Language:

english

File:

PDF, 2.25 MB

english, 2017

22

Reproductive tract extracellular vesicles are sufficient to transmit intergenerational stress and program neurodevelopment

Chan, Jennifer C., Morgan, Christopher P., Adrian Leu, N., Shetty, Amol, Cisse, Yasmine M., Nugent, Bridget M., Morrison, Kathleen E., JaÅ¡areviÄ, Eldin, Huang, Weiliang, Kanyuch, Nickole, Rodgers, A

Journal:

Nature Communications

Year:

2020

Language:

english

File:

PDF, 1.21 MB

english, 2020

23

Towards Standardization of Liver Resections in India: Five Hundred Consecutive Oncological Liver Resections- Trends, Techniques and Outcomes

Patkar, Shraddha, Parray, Amir, Kanetkar, Amol, Shetty, Nitin, Kulkarni, Suyash, Goel, Mahesh

Journal:

Journal of Gastrointestinal Cancer

Year:

2020

File:

PDF, 410 KB

2020

24

Paratesticular Hamartoma in an Infant

Amonkar, Amol Dilip, Shankar, Raghu, Shetty, Padma, Rai, Sandeep, Amir, Mohammad

Journal:

Journal of Health and Allied Sciences NU

Year:

2016

File:

PDF, 67 KB

2016

25

Evolutionary genomic dynamics of Peruvians before, during, and after the Inca Empire

Harris, Daniel N., Song, Wei, Shetty, Amol C., Levano, Kelly S., Cáceres, Omar, Padilla, Carlos, Borda, Víctor, Tarazona, David, Trujillo, Omar, Sanchez, Cesar, Kessler, Michael D., Galarza, Marco, Ca

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 1.95 MB

english, 2018

26

Tornadic Shear Stress Induces a Transient, Calcineurin-Dependent Hypervirulent Phenotype in Mucorales Molds

Wurster, Sebastian, Tatara, Alexander M., Albert, Nathaniel D., Ibrahim, Ashraf S., Heitman, Joseph, Lee, Soo Chan, Shetty, Amol C., McCracken, Carrie, Graf, Karen T., Mikos, Antonios G., Bruno, Vince

Journal:

Year:

2020

File:

PDF, 2.92 MB

2020

27

Simultaneous Transcriptional Profiling of Bacteria and Their Host Cells

Humphrys, Michael S., Creasy, Todd, Sun, Yezhou, Shetty, Amol C., Chibucos, Marcus C., Drabek, Elliott F., Fraser, Claire M., Farooq, Umar, Sengamalay, Naomi, Ott, Sandy, Shou, Huizhong, Bavoil, Patri

Journal:

Year:

2013

Language:

english

File:

PDF, 868 KB

english, 2013

28

Genome-Wide Anaplasma phagocytophilum AnkA-DNA Interactions Are Enriched in Intergenic Regions and Gene Promoters and Correlate with Infection-Induced Differential Gene Expression

Dumler, J. Stephen, Sinclair, Sara H., Pappas-Brown, Valeria, Shetty, Amol C.

Journal:

Frontiers in Cellular and Infection Microbiology

Year:

2016

Language:

english

File:

PDF, 3.02 MB

english, 2016

29

A Genome-Wide Association Study of Idiopathic Dilated Cardiomyopathy in African Americans

Xu, Huichun, Dorn II, Gerald, Shetty, Amol, Parihar, Ankita, Dave, Tushar, Robinson, Shawn, Gottlieb, Stephen, Donahue, Mark, Tomaselli, Gordon, Kraus, William, Mitchell, Braxton, Liggett, Stephen

Journal:

Journal of Personalized Medicine

Year:

2018

Language:

english

File:

PDF, 1.14 MB

english, 2018

30

Tobacco Hornworm ( Manduca sexta ) caterpillars as a novel host model for the study of fungal virulence and drug efficacy

Lyons, Naomi, Softley, Isabel, Balfour, Andrew, Williamson, Carolyn, OâBrien, Heath E., Shetty, Amol C., Bruno, Vincent M., Diezmann, Stephanie

Journal:

Year:

2020

File:

PDF, 6.32 MB

2020

31

A piRNA-like small RNA interacts with and modulates p-ERM proteins in human somatic cells

Mei, Yuping, Wang, Yuyan, Kumari, Priti, Shetty, Amol Carl, Clark, David, Gable, Tyler, MacKerell, Alexander D., Ma, Mark Z., Weber, David J., Yang, Austin J., Edelman, Martin J., Mao, Li

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 3.96 MB

english, 2015

32

Integrated analysis of miRNAs and DNA methylation identifies miRâ132â3p as a tumor suppressor in lung adenocarcinoma

Su, Yun, Shetty, Amol, Jiang, Feng

Journal:

Thoracic Cancer

Year:

2020

File:

PDF, 2.23 MB

2020

33

Targeted sequencing of the human X chromosome exome

Kajari Mondal, Amol Carl Shetty, Viren Patel, David J. Cutler, Michael E. Zwick

Journal:

Year:

2011

Language:

english

File:

PDF, 332 KB

english, 2011

34

Comparative genomics and transcriptomics of Escherichia coli isolates carrying virulence factors of both enteropathogenic and enterotoxigenic E. coli

Hazen, Tracy H., Michalski, Jane, Luo, Qingwei, Shetty, Amol C., Daugherty, Sean C., Fleckenstein, James M., Rasko, David A.

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 4.17 MB

english, 2017

35

Characterization of microRNA transcriptome in lung cancer by next-generation deep sequencing

Ma, Jie, Mannoor, Kaiissar, Gao, Lu, Tan, Afang, Guarnera, Maria A., Zhan, Min, Shetty, Amol, Stass, Sanford A., Xing, Lingxiao, Jiang, Feng

Journal:

Molecular Oncology

Year:

2014

Language:

english

File:

PDF, 1.62 MB

english, 2014

36

New signaling pathways govern the host response to C. albicans infection in various niches

Liu, Yaoping, Shetty, Amol C., Schwartz, Jennifer A., Bradford, L. Latey, Xu, Wenjie, Phan, Qyunh T., Kumari, Priti, Mahurkar, Anup, Mitchell, Aaron P., Ravel, Jacques, Fraser, Claire M., Filler, Scot

Journal:

Genome Research

Year:

2015

Language:

english

File:

PDF, 1.10 MB

english, 2015

37

Repeated sampling facilitates within- and between-subject modeling of the human sperm transcriptome to identify dynamic and stress-responsive sncRNAs

Morgan, Christopher P., Shetty, Amol C., Chan, Jennifer C., Berger, Dara S., Ament, Seth A., Epperson, C. Neill, Bale, Tracy L.

Journal:

Scientific Reports

Year:

2020

File:

PDF, 2.29 MB

2020

38

Detecting geospatial patterns of Plasmodium falciparum parasite migration in Cambodia using optimized estimated effective migration surfaces

Li, Yao, Shetty, Amol C., Lon, Chanthap, Spring, Michele, Saunders, David L., Fukuda, Mark M., Hien, Tran Tinh, Pukrittayakamee, Sasithon, Fairhurst, Rick M., Dondorp, Arjen M., Plowe, Christopher V.,

Journal:

International Journal of Health Geographics

Year:

2020

File:

PDF, 3.35 MB

2020

39

RNA-Seq analysis of isolate- and growth phase-specific differences in the global transcriptomes of enteropathogenic Escherichia coli prototype isolates

Hazen, Tracy H., Daugherty, Sean C., Shetty, Amol, Mahurkar, Anup A., White, Owen, Kaper, James B., Rasko, David A.

Journal:

Frontiers in Microbiology

Year:

2015

Language:

english

File:

PDF, 3.55 MB

english, 2015

40

RNAseq Analysis of the Drosophila Response to the Entomopathogenic Nematode Steinernema

Yadav, Shruti, Daugherty, Sean, Shetty, Amol Carl, Eleftherianos, Ioannis

Journal:

G3 Genes|Genome|Genetics

Year:

2017

Language:

english

File:

PDF, 794 KB

english, 2017

41

Author Correction: Iron restriction inside macrophages regulates pulmonary host defense against Rhizopus species

Andrianaki, Angeliki M., Kyrmizi, Irene, Thanopoulou, Kalliopi, Baldin, Clara, Drakos, Elias, Soliman, Sameh S. M., Shetty, Amol C., McCracken, Carrie, Akoumianaki, Tonia, Stylianou, Kostas, Ioannou,

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 291 KB

english, 2018

42

Bioinformatic analysis of bacteria and host cell dual RNA-sequencing experiments

Marsh, James W., Hayward, Regan J., Shetty, Amol C., Mahurkar, Anup, Humphrys, Michael S., Myers, Garry S. A.

Journal:

Briefings in Bioinformatics

Year:

2017

Language:

english

File:

PDF, 1.35 MB

english, 2017

43

Alternative Splicing of Differentiated Myeloid Cell Transcripts after Infection by Anaplasma phagocytophilum Impacts a Selective Group of Cellular Programs

Dumler, J. Stephen, Sinclair, Sara H., Shetty, Amol C.

Journal:

Frontiers in Cellular and Infection Microbiology

Year:

2018

Language:

english

File:

PDF, 2.24 MB

english, 2018

44

Monocyte Subsets with High Osteoclastogenic Potential and Their Epigenetic Regulation Orchestrated by IRF8

Das, Amitabh, Wang, Xiaobei, Kang, Jessica, Coulter, Alyssa, Shetty, Amol C., Bachu, Mahesh, Brooks, Stephen R., Dell'Orso, Stefania, Foster, Brian L., Fan, Xiaoxuan, Ozato, Keiko, Somerman, Martha J.

Journal:

Journal of Bone and Mineral Research

Year:

2020

File:

PDF, 9.79 MB

2020

45

Molecular epidemiology and genomics of group A Streptococcus

Bessen, Debra E., McShan, W. Michael, Nguyen, Scott V., Shetty, Amol, Agrawal, Sonia, Tettelin, Hervé

Journal:

Infection, Genetics and Evolution

Year:

2015

Language:

english

File:

PDF, 2.13 MB

english, 2015

46

Corrigendum: Brain feminization requires active repression of masculinization via DNA methylation

Nugent, Bridget M, Wright, Christopher L, Shetty, Amol C, Hodes, Georgia E, Lenz, Kathryn M, Mahurkar, Anup, Russo, Scott J, Devine, Scott E, McCarthy, Margaret M

Journal:

Nature Neuroscience

Year:

2017

Language:

english

File:

PDF, 562 KB

english, 2017

47

A Rare Case of Synchronous Cervical and Breast Carcinoma

Padegaonkar, Amol, Chadha, Pranav, Shetty, Archana

Journal:

Indian Journal of Surgical Oncology

Year:

2018

Language:

english

File:

PDF, 408 KB

english, 2018

48

Drosophila anti-nematode and antibacterial immune regulators revealed by RNA-Seq

Castillo, Julio C., Creasy, Todd, Kumari, Priti, Shetty, Amol, Shokal, Upasana, Tallon, Luke J., Eleftherianos, Ioannis

Journal:

Year:

2015

Language:

english

File:

PDF, 2.70 MB

english, 2015

49

A comparative analysis of library prep approaches for sequencing low input translatome samples

Song, Yang, Milon, Beatrice, Ott, Sandra, Zhao, Xuechu, Sadzewicz, Lisa, Shetty, Amol, Boger, Erich T., Tallon, Luke J., Morell, Robert J., Mahurkar, Anup, Hertzano, Ronna

Journal:

Year:

2018

Language:

english

File:

PDF, 2.30 MB

english, 2018

50

Candida albicans quorum-sensing molecule farnesol modulates staphyloxanthin production and activates the thiol-based oxidative-stress response in Staphylococcus aureus

Vila, Taissa, Kong, Eric F., Ibrahim, Ahmed, Piepenbrink, Kurt, Shetty, Amol C., McCracken, Carrie, Bruno, Vincent, Jabra-Rizk, Mary Ann

Journal:

Year:

2019

Language:

english

File:

PDF, 4.08 MB

english, 2019

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